The work aims to study the solution to the integration of supply chain packaging system under the background of intelligent development of logistics. From the beginning on elaboration of the goals of intelligent logistics and the efficiency of supply chain packaging system in the intelligent logistics process, the link and combination points between them were analyzed. The new connotation of supply chain packaging resulting from the development of intelligent logistics and the new requirements for the supply chain packaging system were discussed. Finally, with respect to the features and goals of intelligent logistics, the solution to the integration of supply chain packaging system composed of such key technologies as packaging design and protection, Internet of things, science of green materials and supply chain management was studied and put forward. As the main body of the logistics information carrying and the logistics operation, the packaging system is an important link of the intelligent logistics. The development of the supply chain packaging system and the intelligent logistics should be interdependent and mutually promoted.