The work aims to construct a standardized quality scoring model for the transportation quality of Summer Black Grapes in different e-commerce logistics packages and different production areas, so as to further improve the quality evaluation system of grapes during transportation, and provide a theoretical basis for the combination and utilization of different transportation packages. Taking Summer Black Grapes from five production areas of Yunnan, Jiangsu and Tianjin as the research object, four typical e-commerce packages were used for 48 h physical delivery test. By using correlation and principal component analysis, the e-commerce logistics quality of Summer Black Grapes was comprehensively evaluated, the suitable e-commerce packaging method was screened out, and the environmental impact factors causing quality differences in the transportation process were further analyzed. Three principal components were extracted by principal component analysis, and the cumulative contribution rate was 89.096%. The fruit quality score (Y) model was established by adding the weight of the three principal component scores:Y=0.562Y1+0.186Y2+0.143Y3. The results showed that the transportation quality of Summer Black Grapes in treatment group 1 (corrugated box/ foam box/ice bag/bag in bag) was the best and more stable, and the quality of the other three treatment groups fluctuated greatly. By analyzing the changes of ambient temperature and vibration during transportation, it was found that the EPS foam box had the best thermal insulation performance, and the ice bag assisted cooling could effectively reduce the temperature in the packaging box and improve the commodity of grapes. Increasing the amount of packaging was an effective means to weaken the effect of Z-axis vibration on products. In this study, a comprehensive fruit quality scoring model is established. The model can objectively and accurately reflect the logistics quality of Summer Black Grapes, which is of great significance to promote the rapid development of e-commerce logistics of fresh goods.